Monorepo Restructure and Issue Automation Integration

Summary

This PR integrates the projects branch into the monorepo structure, completes the pnpm workspace setup, fixes build issues, resolves merge conflicts, and adds comprehensive team collaboration documentation.

Changes

🏗️ Monorepo Structure

• ✅ Migrated projects branch content to apps/issue-automation/
• ✅ Created pnpm workspace configuration
• ✅ Integrated Turbo build system
• ✅ Updated all package.json files for workspace compatibility
• ✅ Fixed import paths and configuration files

🔧 Build System Fixes

• ✅ Fixed @hyperagent/config package build (added tsconfig.json)
• ✅ Updated turbo.json to use tasks instead of pipeline (Turbo 2.x)
• ✅ Added packageManager field for workspace resolution
• ✅ Created missing package.json files (sdk-ts, shared-ui, env)
• ✅ Fixed workspace dependency references

📝 Documentation Updates

• ✅ Updated README.md with current monorepo structure and status
• ✅ Created comprehensive team collaboration guide (docs/GUIDE/TEAM/HOW_TO_COLLABORATE.md)
• ✅ Updated SIMPLIFIED_GUIDE.md for monorepo setup
• ✅ Added troubleshooting and best practices

🛠️ Script Improvements

• ✅ Fixed parallel-commit script to detect all uncommitted changes
• ✅ Improved dry-run mode to show complete file list
• ✅ Fixed filename parsing for deleted files
• ✅ Enhanced file grouping for new monorepo paths

🧹 Cleanup

• ✅ Removed .windsurf directory from Git tracking (63 files)
• ✅ Resolved merge conflicts with development branch
• ✅ Added backup directories to .gitignore
• ✅ Deleted projects branch (local and remote)

📁 File Organization

• ✅ Moved services to correct monorepo location
• ✅ Organized infrastructure files (k8s overlays)
• ✅ Cleaned up obsolete documentation files
• ✅ Updated .gitignore for new structure

Key Features

Monorepo Setup

• pnpm workspace with Turbo for efficient builds
• Proper package structure (apps, services, packages)
• Workspace dependencies configured
• Build system fully operational

Issue Automation

• GitHub Projects automation integrated
• Issue tracking scripts in apps/issue-automation/
• Implementation tracking in docs/implementation/

Team Collaboration

• Comprehensive collaboration guide
• GitFlow branch strategy documented
• Script usage explained
• Best practices and pitfalls covered

Testing

• ✅ pnpm install completes successfully
• ✅ Turbo commands work correctly
• ✅ Build succeeds for all packages
• ✅ Dry-run shows all changes accurately
• ✅ No linting errors
• ✅ Merge conflicts resolved

Breaking Changes

None - this is a structural reorganization that maintains backward compatibility.

Checklist

• Code follows project standards
• Documentation updated
• Build system working
• All tests passing (where applicable)
• No breaking changes
• README updated
• Merge conflicts resolved
• Cleanup completed

Related Issues

• Integrates content from projects branch
• Completes monorepo restructure
• Fixes build and workspace setup issues
• Resolves merge conflicts with development

Next Steps

After merge:

1. Test in development environment
2. Update CI/CD workflows if needed
3. Onboard team on new collaboration guide
4. Continue sprint implementation